Activity 01
Sequence Comparison Activity: Building a Molecular Phylogeny
Provide students with simplified cytochrome c amino acid sequences for five species (human, chimpanzee, horse, tuna, yeast). Students count the number of differences between each pair, fill in a pairwise difference matrix, and use the matrix to construct a branching diagram placing the most similar species closest together. Groups compare their diagrams and discuss what the molecular data says about relatedness.
Explain why embryos of different vertebrates look so similar in early development.
Facilitation TipDuring Sequence Comparison Activity, circulate and ask pairs to justify their phylogenetic tree with at least two explicit sequence matches.
What to look forProvide students with simplified diagrams of early vertebrate embryos (e.g., fish, chicken, human). Ask them to identify and label at least two homologous structures visible in the early stages and briefly explain why their similarity supports common ancestry.